Version 7.7 - Released: 04/08/2019 - Content: 107395 neurons


Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)
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Details about selected neuron
NeuroMorpho.Org ID :  NMO_01145
Neuron Name :  gR002P1
Archive Name :  Svoboda
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  0.0 day
Max Age :  36.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  layer 5
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  Not reported
Slice Thickness :  300  μm
Tissue Shrinkage :  Not Reported (no values given)
Not corrected
Objective Type :  Not reported
Magnification :  60x
Reconstruction Method :  Neurolucida
Date of Deposition :  2005-12-31
Date of Upload :  2007-05-04
Persistence Vector :  gR002P1.pvec
Note :  From Barrel Cortex. When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  Laminar and columnar organization of ascending excitatory projections to layer 2/3 pyramidal neurons in rat barrel cortex

Measurements
Soma Surface :  796.37 μm2
Number of Stems :  5
Number of Bifurcations :  87
Number of Branches :  179
Overall Width :  1271.95 μm
Overall Height :  2163.42 μm
Overall Depth :  438.25 μm
Average Diameter :  0.64 μm
Total Length :  21419.8 μm
Total Surface :  38631.3 μm2
Total Volume :  9783.26 μm3
Max Euclidean Distance :  1448.21 μm
Max Path Distance :  1867.11 μm
Max Branch Order :  14
Average Contraction :  0.9
Total Fragmentation :  1957
Partition Asymmetry :  0.52
Average Rall's Ratio :  1.91
Average Bifurcation Angle Local :  76.68°
Average Bifurcation Angle Remote :  75.96°
Fractal Dimension :  1.03

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